-alignmentInRange:

returns a subalignment

-length

obtaining the length of the alignment

-sequenceAtIndex:

obtaining the BCSequence at the given index

-symbolSet

obtaining the BCSymbolSet corresponding to the aligned BCSequences

-symbolsForColumnAtIndex:

returns a NSArray containing the symbols at the given alignment column

returns a subalignment

- (BCSequenceAlignment *)alignmentInRange:(NSRange)aRange; 

obtaining the length of the alignment

- (unsigned int)length; 

obtaining the BCSequence at the given index

- (BCSequence *)sequenceAtIndex:(unsigned int)aIndex;

obtaining the BCSymbolSet corresponding to the aligned BCSequences

- (BCSymbolSet *)symbolSet; 

returns a NSArray containing the symbols at the given alignment column

- (NSArray *)symbolsForColumnAtIndex:(unsigned int)aColumn; 

© 2008 The BioCocoa Project.
Last Updated: Wednesday, October 01, 2008