Revision 420 - (view) (annotate) - [select for diffs]
Modified Thu Nov 22 17:27:44 2007 UTC (16 years, 10 months ago) by duarte
File length: 2140 byte(s)
Diff to previous 419

First implementation of the new graph framework using JUNG2. Still a few classes to fix, but all basic functionality is there.
NOTE: at the moment ProtStructGraph is a SparseGraph which doesn't guarantee that the graph has no parallel or loop edges (I thought that would be solved by using the SimpleGraph interface but it doesn't, that's only a marker interface)

Revision 419 - (view) (annotate) - [select for diffs]
Modified Thu Nov 22 14:09:18 2007 UTC (16 years, 10 months ago) by duarte
File length: 2044 byte(s)
Diff to previous 327

Re-branching for JUNG2 development

Revision 327 - (view) (annotate) - [select for diffs]
Modified Mon Oct 1 08:23:57 2007 UTC (17 years ago) by stehr
Original Path: trunk/testDeltaDistanceMap.java
File length: 2044 byte(s)
Diff to previous 321

fixed missing references to constants in class AA

Revision 321 - (view) (annotate) - [select for diffs]
Added Tue Sep 18 08:44:30 2007 UTC (17 years ago) by stehr
Original Path: trunk/testDeltaDistanceMap.java
File length: 2120 byte(s)

added test program for difference distance maps, updated Manifest to v0.8.5