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root/owl/trunk/proteinstructure/Box.java
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Revision 228 - (view) (annotate) - [select for diffs]
Modified Mon Jul 9 14:32:47 2007 UTC (17 years, 2 months ago) by duarte
File length: 1983 byte(s)
Diff to previous 226
Now can do crossed contacts also with geometric hashing
Renamed getGraphGeometricHashing to get_graph (so interface remains as it was before we introduced the geometric hashing)
Revision 226 - (view) (annotate) - [select for diffs]
Added Fri Jul 6 13:43:30 2007 UTC (17 years, 2 months ago) by duarte
File length: 1420 byte(s)
First geometric hashing implementation for calculating graph (with new class Box). Only does non-crossed cts
Geometrich hashing graph calculation kept in a separate method than normal get_graph. Still either of the methods can be used.
Using javax.vectormath objects for the vectors (distance method also from that)
Using TreeMap for get_coords_for_ct

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