[ViewVC] Log of: owl/trunk/proteinstructure/NbhProbDistribution.java

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Revision 242 - (view) (annotate) - [select for diffs]
Modified Wed Aug 1 07:47:18 2007 UTC (17 years, 2 months ago) by duarte
File length: 2131 byte(s)
Diff to previous 241

Got rid of doneRes ArrayList in getRanks, was redundant

Revision 241 - (view) (annotate) - [select for diffs]
Modified Tue Jul 31 16:38:13 2007 UTC (17 years, 2 months ago) by duarte
File length: 2189 byte(s)
Diff to previous 199

Now dealing correctly with ties.
Implemented getResiduesSortedByRank
Changed dist to be a TreeMap

Revision 199 - (view) (annotate) - [select for diffs]
Modified Mon Jun 18 09:03:39 2007 UTC (17 years, 3 months ago) by duarte
File length: 1367 byte(s)
Diff to previous 183

Implemented getRanks()

Revision 183 - (view) (annotate) - [select for diffs]
Modified Tue Jun 5 14:32:04 2007 UTC (17 years, 3 months ago) by duarte
File length: 987 byte(s)
Diff to previous 181

Fixed bug: calculateEntropy was wrong when a pi was 0

Revision 181 - (view) (annotate) - [select for diffs]
Added Tue Jun 5 12:27:49 2007 UTC (17 years, 3 months ago) by duarte
File length: 845 byte(s)

New class NbhProbDistribution
In NodeNbh implemented a few static classes to convert between different motifs and to match motifs using differing criteria

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