owl/trunk/testGraph2Pml.java

import java.sql.*;
import java.io.*;
import tools.*;

public class testGraph2Pml {

        public static void main(String[] args) {

                String connFile = "/project/StruPPi/ioannis/cnfs/msdgraph.my.cnf";
        
                mySQLConnect SQLC =  new mySQLConnect();
                SQLC.readConnectionFile(connFile);
                Connection conn = SQLC.openConnection();
        
                PrintWriter serverOutPw = new PrintWriter(new PymolServerOutputStream("http://blau:9123"), true);
                PyMol pml = new PyMol(serverOutPw);
        
                String pdbFileName = Msdsd2Pdb.export2File("1rx4", 20717, 52567, 9, "/project/StruPPi/ioannis/tmp");
                String molObjName = pml.loadPDB(pdbFileName, "/project/StruPPi/ioannis/tmp");
                System.out.println(molObjName);
        
                Graph2Pml graphPml = new Graph2Pml(serverOutPw, molObjName, 33729, "SC_SC", "SC_SC_in+SC_SC_out", "SC_SC", "true", "true", true, false, false, conn);
                graphPml.exportPML();
        
                SQLC.closeConnection(conn);     

    }

} // end of class Graph2Pml
Revision:	42
Committed:	Tue Mar 21 19:13:20 2006 UTC (18 years, 6 months ago) by filippis
File size:	927 byte(s)
Log Message:	Adding Graph2Pml and testGraph2Pml classes (non functional code!)
Line	User	Rev	File contents
1	filippis	42	import java.sql.*;
2			import java.io.*;
3			import tools.*;
4
5			public class testGraph2Pml {
6
7			public static void main(String[] args) {
8
9			String connFile = "/project/StruPPi/ioannis/cnfs/msdgraph.my.cnf";
10
11			mySQLConnect SQLC = new mySQLConnect();
12			SQLC.readConnectionFile(connFile);
13			Connection conn = SQLC.openConnection();
14
15			PrintWriter serverOutPw = new PrintWriter(new PymolServerOutputStream("http://blau:9123"), true);
16			PyMol pml = new PyMol(serverOutPw);
17
18			String pdbFileName = Msdsd2Pdb.export2File("1rx4", 20717, 52567, 9, "/project/StruPPi/ioannis/tmp");
19			String molObjName = pml.loadPDB(pdbFileName, "/project/StruPPi/ioannis/tmp");
20			System.out.println(molObjName);
21
22			Graph2Pml graphPml = new Graph2Pml(serverOutPw, molObjName, 33729, "SC_SC", "SC_SC_in+SC_SC_out", "SC_SC", "true", "true", true, false, false, conn);
23			graphPml.exportPML();
24
25			SQLC.closeConnection(conn);
26
27			}
28
29			} // end of class Graph2Pml