Revision 347 - (view) (annotate) - [select for diffs]
Modified Thu Oct 11 08:54:50 2007 UTC (17 years, 4 months ago) by duarte
File length: 15644 byte(s)
Diff to previous 343

Writing report to file instead of standard output
Catching unknown errors in runDistgeom (all other non-zero exit values)

Revision 343 - (view) (annotate) - [select for diffs]
Modified Wed Oct 10 16:19:18 2007 UTC (17 years, 4 months ago) by stehr
File length: 15381 byte(s)
Diff to previous 342

fixed bug when running distgeom, now waiting for process to exit before checking exit status

Revision 342 - (view) (annotate) - [select for diffs]
Modified Wed Oct 10 15:52:36 2007 UTC (17 years, 4 months ago) by stehr
File length: 15344 byte(s)
Diff to previous 341

added error handling for killed tinker process with error code 139 (presumably out of memory)

Revision 341 - (view) (annotate) - [select for diffs]
Modified Wed Oct 10 15:14:55 2007 UTC (17 years, 4 months ago) by duarte
File length: 15172 byte(s)
Diff to previous 338

Now capturing exit status 137 (2 instances of tinker running in same machine)
Now outputting progress per model

Revision 338 - (view) (annotate) - [select for diffs]
Modified Fri Oct 5 11:56:28 2007 UTC (17 years, 4 months ago) by duarte
File length: 14717 byte(s)
Diff to previous 323

Initial commit of reconstruct script. Works only sometimes!! Some others doesn't run distgeom without apparent reason!
Throwing less exceptions in ConstraintsMaker

Revision 323 - (view) (annotate) - [select for diffs]
Modified Tue Sep 18 14:13:14 2007 UTC (17 years, 5 months ago) by duarte
File length: 14492 byte(s)
Copied from: trunk/proteinstructure/TinkerRunner.java revision 322
Diff to previous 322

Moved tinker stuff to its own package

Revision 322 - (view) (annotate) - [select for diffs]
Added Tue Sep 18 13:59:33 2007 UTC (17 years, 5 months ago) by duarte
Original Path: trunk/proteinstructure/TinkerRunner.java
File length: 14502 byte(s)

Initial commit of TinkerRunner and exception class to go with it TinkerError