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Copied the aglappe-jung branch into trunk.
Submission of commands is now async
Re-branching for JUNG2 development
Using apache xmlrpc version 3.0 in PyMolServerOutputStream
prevent overlong commands from being sent to the server
fixed bug for very long command strings (> 255 characters)
removed some debug code
Corrected some bad mistake
Initial commit of the remote-pymol-from-java stuff
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