See also rosettafold.txt

checkCIFFile() in util.js called in fg.htm sets cifIsAF

pdbIsAlphaFold
pdbIsAFColab
AlphaFoldFamily
alphaFoldColorScheme
alphaFoldIndex = 25;

presentAFRF() in consurftemp.js:
	When model is AlphaFold/RoseTTAFold and is NOT consurfTemp,
	provides links to color by AF/RF in MIT & Views tab, and colors the molecule by AF/RF.

** getAlphaFold() in moltab.js generates mmreport for the MIT.

askAFColab() moltab.js, caller startupPanels(), sets pdbIsAFColab for no-header-section PDB files.
AF confidences do not exceed 100.0. If maxtemp > 100.0, afColabAnswered = true in controls.js,
so askAFColab() is not called.

headerAlphaFoldDB() moltab.js, called by startupPanels(), sets pdbIsAlphaFold from header contents.

alphaFoldColors() moltab.js colors molecule and refreshes AF help.

makeAlphaFoldSpt() scripts.js called by alphaFoldColors().

makeAlphaFoldHelp() help3.js called  by alphaFoldColors().



suggestAlphafold() help.js makes text recommending comparison of AF with empirical.

makeAlphaFoldSequenceLink() Used for the links to Sequences in the MIT.