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The experiment table summarizes the parameters of each mapping experiment. This table contains the following fields:
Cross type | Code | Example
|
---|---|---|
Backcross | BC | BC
|
Selfed generation i intercross | SFi | SF2
|
Randomly mated generation i intercross | RFi | RF3
|
Recombined Inbred via selfing | RI0 | RI0
|
Recombined Inbred via sib mating | RI1 | RI1
|
Intermated (i generations) Recombined Inbred via selfing | IRI0i | IRI04
|
Intermated (i generations) Recombined Inbred via sib mating | IRI1i | IRI13
|
For example, inserting 5 mapping experiments leads to the following file
map mapping.function mapping.unit mapping.expansion cross.type cross.name cross.size exp1 haldane cM 0 SF2 Mo17xB73 200 exp2 haldane cM 1 RF4 F2xF252 300 exp3 kosambi M 0 BC H99xF2 150 exp4 haldane cM 1 IRI04 F2xF252 400 exp5 haldane cM 0 SF4 Mo17xF2 150 |