[BiO BB] Re: BiO_Bulletin_Board digest, Vol 1 #21 - 1 msg

Dear Venkat,
If you want just the amino acid  sequence of the helix
or a sheet, you may get that from any modelling
program like rasmol wherein you have the option to see
the aminoacid sequence corresponding to the structure.
for nucleotide sequence, you may have to convert from
protein to nucleotide sequence (different online tools
are available).
Regards,
Kiran kumar.c 

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>   1. [Fwd: Extracting helix/strand sequences from
> pdb:] (J.W. Bizzaro)
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> Message: 1
> Date: Mon, 16 Apr 2001 14:38:40 +0000
> From: "J.W. Bizzaro" <jeff at bioinformatics.org>
> To: bio_bulletin_board at bioinformatics.org
> Subject: [BiO BB] [Fwd: Extracting helix/strand
> sequences from pdb:]
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> From: "Mathura, Venkatarajan S." <vsmathur at utmb.edu>
> Subject: Extracting helix/strand sequences from pdb:
> To: "'bio_bulletin_board-admin at bioinformatics.org '"
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> Hello,
> 
>   Do anyone have a script or know of a source where
> I can obtain the
> sequences of helix/sheet
> from pdb file. Any help will be appreciated! 
> 
> Thanks,
> 
> Venkat  
> 
> 
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