[BiO BB] Re: Re: [BiO BB] Domain recognition
balarji at rediffmail.com
Tue Oct 9 11:36:59 EDT 2001
you can use..prosite,emotif,....programs like this that exclusively are used to search the domains in a particular protein seqences..
On Tue, 09 Oct 2001 nabula easter wrote :
> how easy is to find a domain in protein.
> is there any protocol in identifying protein. i have a
> protein which is related to dolichyl -
> transferase,which do not have any domain , now when i
> do PSI-BLAST i find some other proteins which has some
> identical and similar areas ? does this mean that
> there is a domain in these proteins.
> would you please help me pointing any protocol to
> finalise any putative domain. IF i am looking at a
> novel domain how to validate that domain ?
> please suggest any publications where the rules are
> thank you
> Do You Yahoo!?
> NEW from Yahoo! GeoCities - quick and easy web site
> hosting, just $8.95/month.
> BiO_Bulletin_Board maillist -
> BiO_Bulletin_Board at bioinformatics.org
More information about the BBB