[BiO BB] sequence editing software

martin goodson martingoodson at hotmail.com
Fri Aug 16 11:02:46 EDT 2002


>
>Do you really want to "edit" several Mb long multiple sequence alignments?
>
>If you are trying gap-closure and sequence finishing, look into
>Consed from the Phred/Phrap/Consed/Autofinish package.
>http://www.phrap.org/consed/consed.html

you're right- it's for gap closure so only overlap alignments over short 
regions.

thanks for the info
martin



>
>cheers
>-thomas
>
>--
>Sicheritz-Ponten Thomas, Ph.D, thomas at biopython.org      (
>Center for Biological Sequence Analysis                   \
>BioCentrum-DTU, Technical University of Denmark            )
>CBS: +45 45 252485      Building 208, DK-2800 Lyngby  ##----->
>Fax: +45 45 931585      http://www.cbs.dtu.dk/thomas       )
>                                                           /
>      ... damn arrow eating trees ...                     (




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