[BiO BB] AC numbers

Raju S raju2002 at lycos.com
Sat Jun 1 13:13:26 EDT 2002


Hi Wilfred,

What Neeraj said is correct. After getting your fasta format you have to run it through Blast. Then you can get the best identical matching.

rgds,
Raju.

On Fri, 31 May 2002 17:05:40  
 Neeraj_Tripathi wrote:
>Hi Wilfred, 
>   Please go to NCBI site (http://www.ncbi.nlm.nih.gov/entrez) and choose
>"Nucleotide" as database. Submit the AC number and you get the URL for the
>accession number. Go to the URL, change the 'Display' as "FASTA" in the
>drop-down box and you get the sequence in FASTA format.
>
>rgds
>Neeraj
>
>> ----------
>> From: 	Wilfred D. Stein[SMTP:wdstein at vms.huji.ac.il]
>> Reply To: 	bio_bulletin_board at bioinformatics.org
>> Sent: 	Friday, May 31, 2002 4:33 PM
>> To: 	bio_bulletin_board at bioinformatics.org
>> Subject: 	[BiO BB] AC numbers
>> 
>> I am using a paper which has GenBank accession numbers in the form
>> AC003080, for instance.  How do I find the relevant sequnce from
>> GenBank..GenBank does NOT accept such AC or AL numbers
>> 
>> wds
>> 
>> 
>> Yours sincerely,
>> Wilfred D. Stein
>> (Emeritus Professor of Biophysics)
>> 
>> BIOLOGICAL CHEMISTRY
>> SILBERMAN INSTITUTE OF LIFE SCIENCES
>> HEBREW UNIVERSITY of  JERUSALEM
>> GIVAT RAM, JERUSALEM 91904 ISRAEL
>> Tel + (+972) 2 6585679 (office)   6525649 (home)
>> Cellular phone : (+972) 51 822391
>> Fax :   (+972) 2 6585440
>> Email : WDSTEIN at HUJI.AC.IL
>> 
>> 
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