[BiO BB] Re: Extracting location from a genbank flatfile

govind mk mkgovindis at yahoo.com
Wed Apr 9 22:43:47 EDT 2003


Hi all

I am stuck with a rather simple problem.
I would like to extract locations of specific features
(Eg .CDS)from a Genbank flat file.

I tried using Bioperl but couldnt manage to get the 
exact locations for complicated representations of
locations such as
complement(join(295405..295443,295492..295529))
as Bioperl modules return the minimum start and
maximum stop.

Any suggestions ???

-Govind



__________________________________________________
Do you Yahoo!?
Yahoo! Tax Center - File online, calculators, forms, and more
http://tax.yahoo.com



More information about the BBB mailing list