[BiO BB] GO <--> SCOP mapping?

Dan Bolser dmb at mrc-dunn.cam.ac.uk
Wed Dec 29 08:41:31 EST 2004


On Tue, 28 Dec 2004, Iddo Friedberg wrote:

>Hi all,
>
>Is there a GO to SCOP mapping? I know of GOA_PDB, I need a SCOP domain 
>based table.


There is SCOPEC, for SCOP to EC mapping, and I think they were moving into
the GO arena.

http://www.enzome.com/databases/scopec.php


IMHO EC is a better ontology than the GO Molecular Function Ontology, but
I am happy to be slammed on that point.

I was working on a SCOP <-> GO Biological Process Ontology mapping (which
isn't trivial (so far as I can tell)), but gave up due to lethargy.


>Apologies for cross-posting, Happy New Year,

You too, all the best,
Dan.


>Iddo
>
>




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