[BiO BB] SWDA
enoumen at rsvs.ulaval.ca
Fri Sep 17 10:50:50 EDT 2004
excuse me for my last message in french, it was not meant for the list.
----- Original Message -----
From: "Diego Martinez" <sariego9 at yahoo.com>
To: <bio_bulletin_board at bioinformatics.org>
Sent: Friday, September 17, 2004 10:44 AM
Subject: [BiO BB] SWDA
> Hello all,
> I am searching for an implementation of the Smith-Waterman
> algorythm, but with the double-affine gapping that is
> publicly available. I know FASTA has a full SW implementation,
> but it does not offer the second gap penalty score option.
> I also am aware that Paracel and DeCypher both have these,
> but they are far from free. Any help would be
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> BiO_Bulletin_Board maillist - BiO_Bulletin_Board at bioinformatics.org
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