[BiO BB] aligning character data other than DNA or protein

[Corné HW Klaassen]

Iain

Clustal only accepts 24 letters. Numbers and other characters are 
disregarded. So what if I have more than 24 different characters?

Corné

-----------------------------------------------------------------------------------------
dr. Corné H.W. Klaassen, Molecular Biologist
Canisius Wilhelmina Hospital, Molecular Biology Unit, C60-C70
Weg door Jonkerbos 100, 6532 SZ Nijmegen, The Netherlands.

tel: #31-24-3658670 (office)
tel: #31-24-3658677 (direct)
fax: #31-24-3658671
E-Mail: c.klaassen at cwz.nl



Iain Wallace wrote:

>Hi,
>
>I think ClustalW can do that, as long as it is in a sequence format.
>
>Iain 
>
>On 8/31/05, Corné HW Klaassen <c.klaassen at cwz.nl> wrote:
>  
>
>>Hi all,
>>
>>Does anybody know of a convenient tool to align stretches of character
>>data other than DNA or protein (i.e. numbers: 01-02-03-05 and
>>01-02-04-05) that is also able to deal with insertions and deletions etc.?
>>
>>Thanks,
>>
>>Corné
>>
>>--
>>-----------------------------------------------------------------------------------------
>>dr. Corné H.W. Klaassen, Molecular Biologist
>>Canisius Wilhelmina Hospital, Molecular Biology Unit, C60-C70
>>Weg door Jonkerbos 100, 6532 SZ Nijmegen, The Netherlands.
>>
>>tel: #31-24-3658670 (office)
>>tel: #31-24-3658677 (direct)
>>fax: #31-24-3658671
>>E-Mail: c.klaassen at cwz.nl
>>
>>_______________________________________________
>>Bioinformatics.Org general forum  -  BiO_Bulletin_Board at bioinformatics.org
>>https://bioinformatics.org/mailman/listinfo/bio_bulletin_board
>>
>>    
>>
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>