[BiO BB] generate random motifs
Gao Zhang
mayagao at gmail.com
Wed Jul 13 13:21:45 EDT 2005
Hi all,
I need some help to generate random motifs. The goal is to
generate a random motif of width w. Each position will
have a dominant letter with probability around 0.85.
I know there is python module TAMO (
http://jura.wi.mit.edu/fraenkel/TAMO/documentation/TAMO.MotifTools.html#Motif-emit
)
which can do this job.
Can anybody know how to do this using Perl/Bioperl?
Thank you very much and look forward to your reply!
Best Regards,
Maya
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