[BiO BB] PUBMED --> Genes ??

Dan Bolser dmb at mrc-dunn.cam.ac.uk
Wed Nov 2 09:32:04 EST 2005


Siddhartha Basu wrote:
> Hi,
> Try this one.
> ftp://ftp.ncbi.nlm.nih.gov/gene/DATA/gene2pubmed.gz

Brilliant!

Now I am just missing a pubmed database, so I can link keywords to 
PMID's and then to genes...

I heard about a 'pubmed database' for downloading, but I can't find it...


> -siddhartha
> 
> Dan Bolser wrote:
> 
>> Hello,
>>
>> After playing with some stuff on the NCBI / PubMed site, I wonder if 
>> there is a list mapping PUBMED ID to Gene ID (of some kind, like 
>> refseq for example)?
>>
>> For a given gene I would like to look up all the associated 
>> literature. Any recomendations on how to do that?
>>
>> Is there a tab delimited pubmed database that links pubmed id to 
>> keywords for example?
>>
>> Cheers,
>> Dan.
>>
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> 
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