[BiO BB] How to calculate the value of K and Lambda for two sequence alignment
journalshoyaib at gmail.com
Fri Feb 3 06:26:03 EST 2006
Using Smith Waterman algorithm I want to align two sequences. Aftet that I
want to calculate the expectation value. For calculating the expectation
value we know that
E = Kmn e -lx
But how can I calculate the value of K and l .
Is there any formula that can help me to calculate the value of K and l , and
then the expectation value.
Thanking all in advance
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