[BiO BB] Re: Genes Involved in KEGG Pathways

[Karthik Raman]

Hi

One way I can think of is to have a LinkDB db2db query from drosophila
to reaction (or vice-versa).

Check this out:
http://www.genome.jp/dbget-bin/www_linkdbsub?dbkey=linkdb&mode=db2db&sort=to&keywords=dme&targetdb=rn&max_hit=nolimit

This can be reached from the page:
http://www.genome.jp/dbget-bin/www_linkdb

Regards
Karthik


> Date: Mon, 23 Jan 2006 23:12:34 -0500
> From: Samantha Fox <bioinfosm at gmail.com>
> Subject: Re: [BiO BB] Fasta file of KEGG pathways
> To: "The general forum at Bioinformatics.Org"
>         <bio_bulletin_board at bioinformatics.org>
> Message-ID:
>         <726450810601232012g748eae3ag74a9abddfef5b05b at mail.gmail.com>
> Content-Type: text/plain; charset="windows-1252"
>
> Is there a good quick and dirty way to find the genes involved in a
> particular KEGG pathway .. for a particular organism, say Drosophila ?
>
> Cheers...

--
**************************************************************************
   KARTHIK RAMAN
   Graduate Research Student
   Supercomputer Education and
       Research Centre/Bioinformatics Centre
   Indian Institute of Science
   Bangalore - 560 012

   E-mail: karthik AT rishi.serc.iisc.ernet.in
   Webpage: http://openwetware.org/wiki/Karthik_Raman
   Blogspot: karthikraman.blogspot.com
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