[BiO BB] A tool for gene identification..
Iddo Friedberg
idoerg at burnham.org
Mon May 1 18:39:47 EDT 2006
Which databases have you tried blasting against? Have you tried a full
genomic database like Ensembl or the human genome at Santa Cruz?
./I
Mhmoud Elhefnawi wrote:
> Dear colleagues,
> Our lab isolated a 196 bp fragment from humans from more than one
> cell type ( part of a gene that is an oncogene for cancer). Conducting
> BLAST searches of all types resulted in no homology to any published
> human gene. Is there some tool that can identify the human genome to:
> 1) locate on which chromosome is this sequence?
> 2) enable us to get the rest of the sequence of that gene?
> 3) predict this gene based on the sequence submitted?
>
> Your help is very highhly appreciated.
> Thanks,
> Mahmoud
>
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Iddo Friedberg, Ph.D.
Burnham Institute for Medical Reseach
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