[BiO BB] Percentage sequence identity calculation program

[Martin Jambon]

Hi,

A summary of the issues concerning percentage identity can be read (and 
extended) at wikiomics.org:
   http://wikiomics.org/wiki/Percentage_identity


Martin


On Tue, 9 May 2006, Lipika Ray wrote:

> Hello,
>
> I have a set of fragments of sequences which are of different length. I
> want to calculate percentage sequence identity of those sequences. Which
> program will be the fittest to do this type of calculation? I have seen
> that lot of databases are reporting about percentage sequence identity of
> the sequences used, but by which program they calculate it, I have no idea
> about that. Please help me if anyone have any clue.
> Thanks in advance,
>
> Lipika
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--
Martin Jambon, PhD
http://martin.jambon.free.fr

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