[BiO BB] quasispecies or ambiguities
Mhmoud Elhefnawi
mahef111 at link.net
Tue May 30 10:19:01 EDT 2006
Dear members,
I have sequences after PCR and direct sequencing of some hepatitis c virus from patients.
The sequencer output has some positions that are A/g, or C/t etc...I want to know if these represent quasispecies or ambiguities? and if they represent quasispecies, what is the best way to deal with that? to write all different combinations of these in the sequence as different quasispecies or what?
Thank you all in advance for your kind assistance,
Mahmoud
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