[BiO BB] Smith-Waterman on FPGA

[Nur'Aini Abd.Rashid]

Look at work by Liao h.Y et. al (2004)


On Mon, 16 Oct 2006, Deepan 
Chakravarthy wrote:

> Date: Mon, 16 Oct 2006 22:26:19 +0530
> From: Deepan Chakravarthy <codeshepherd at gmail.com>
> Reply-To: General Forum at Bioinformatics.Org
>     <bio_bulletin_board at bioinformatics.org>
> To: General Forum at Bioinformatics.Org
>     <bio_bulletin_board at bioinformatics.org>
> Cc: anand at novaglobal.com.sg, henny at novaglobal.com.sg, ivanho at novaglobal.com.sg
> Subject: [BiO BB] Smith-Waterman on FPGA
> 
> Hello,
> I am curious to know if anyone has programmed Smith-Waterman algorithm
> into FPGA. I guess FPGA is being used to run BLAST. Anyone who is
> currently playing with FPGA and any of the sequence alignment
> algorithms please share your experience.
> Thanks
> Deepan Chakravarthy N
> http://www.codeshepherd.com
>
> _______________________________________________
> General Forum at Bioinformatics.Org - BiO_Bulletin_Board at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/bio_bulletin_board
>
> -- 
> This message has been scanned for viruses and
> dangerous content by MailScanner, and is
> believed to be clean.
>
>

-- 
This message has been scanned for viruses and
dangerous content by MailScanner, and is
believed to be clean.