[BiO BB] question about Agilent microarray data format

James Anderson janderson_net at yahoo.com
Fri Sep 1 15:03:20 EDT 2006


Hi, 
  I have some Agilent microarray data. I am not familiar with the format. (I am more familiar with Affy data). There are some columns named "gProcessedSignal" "rProcessedSignal", "LogRatio", etc. I guess it's more like cDNA with two channels. So should I use the LogRatio value to perform the next step analysis (gene selection, PCA, clustering, etc).  

  Thanks,
  James

 		
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