[BiO BB] hi help me pls

[lijo skb]

Hi Deepan,

Is it possible to predict the stucture of a new sequence with gromacs?

Lijo

On Dec 17, 2007 8:02 PM, Deeþan Chakravarthy <codeshepherd at gmail.com> wrote:

> jay ananth wrote:
> > I need one help from u...
> >
> > search for best tools for the following :
> > 1.Secondary Structure prediction in RNA
> > 2.Protein Secondary Structure Prediction.
> > 3.Prediction of disordered regions in proteins..
> > 4.Case Std on Structure-function relationships in proteins
> > 5.Prediction of transmembrane regions in proteins
> > 6.Characterization of antigenecity in polypeptides- epitope mapping
> >
> >
> >
> >
> Are you looking for computational tools to do the above ? Can you be
> more specific ?   Autodock, Gromacs are some of the tools that you can
> use for protein structure prediction.
>
> --
> Deepan
> http://codeshepherd.com/
> http://codeshepherd.blogspot.com/
> http://sudoku-solver.net/
>
>
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-- 
Lijo