[BiO BB] PWM search tool

Eugene Bolotin ybolo001 at student.ucr.edu
Wed Feb 7 17:09:32 EST 2007


Try googling,
motifscanner,

On 2/7/07, Samantha Fox <bioinfosm at gmail.com> wrote:
>
> Hey !
>
> I am looking for a good tool on PWM search in DNA sequences. Patser comes
> across as a popular one but I am uncertain about the threshold score or
> p-value to use, to count PWM hits.
>
> Any views !
>
> ~S
> _______________________________________________
> General Forum at Bioinformatics.Org -
> BiO_Bulletin_Board at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/bio_bulletin_board
>



-- 
Eugene Bolotin
Ph.D. candidate
Genetics Genomics and Bioinformatics
University of California Riverside
ybolo001 at student.ucr.edu
Dr. Frances Sladek Lab



More information about the BBB mailing list