[BiO BB] Sequence similarity

Sterten at aol.com Sterten at aol.com
Wed May 16 12:50:29 EDT 2007


OK, I wrote one for influenza.
It's "beta" , description in bird-flu forums...
I could search for description, if someone is interested.
 
_http://magictour.free.fr/seqa.zip_ (http://magictour.free.fr/seqa.zip) 
 
(C-sourcecode attached to the executable)
 
 
 
 
runs under Windows or DOS
 
seqa.exe (for viruses, 8 segments)
seq1.exe (for single  segments)
qingh6.3w3  (Qinghai-viruses)
egy7s.10    (HA-Segments)
 
seqa qingh6.3w3 > xx
stores the lists of distances and mutations in  file xx
 
seqa without Parameter gives Menu

extra Programme for Horizontal Sorting etc.
other files etc. on  demand




   



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