[BiO BB] How to download Protein complexes from PDB ?
dan.bolser at gmail.com
Thu Sep 13 01:21:47 EDT 2007
On 12/09/2007, Shameer Khadar <skhadar at gmail.com> wrote:
> This is a simple yet a tricky issue : :)
> I need to download a set of 200 complexes from PDB (they can include
> dimers, trimers and tetramers). But they should only contain
> DNA/RNA along with the protein). Is it possible get such 200
> structures from PDB through web search. If yes, what search
> keyword/strategy should I
> use ? Or is there any other way to get it done using SRS/BioMart ?
The best place to ask this question is on the pdb-l mailing list.
I have a list of ~300 protein complexes that I use in my studies that
I can put somewhere if you like... they are not DNA / RNA / Ligand
free, but they contain less than 5% of these types of atoms by
> General Forum at Bioinformatics.Org - BiO_Bulletin_Board at bioinformatics.org
More information about the BBB