[BiO BB] Enhancer databases

[Mike Marchywka]

Thanks but the as-posted link failed for me. In any case, the SNP database
was listed as most-popular at the time I hit the site.
One point I would make in favor of my prosite annotations versus
3D "things" would depend on how well these things can highlight important
post-translational modifications. The thing I ran into recently was
gain-of-glycosylation site as a disease mechanism
( Current Opinion in Genetics & Development 2007, 17:245–251 ).

http://biodatabase.org/index.php/SNP%40Domain

Does anyone have comments on the SNP explorer tools or a good tutorial link?
Offhand, 3D seems like a complicated way to go and there may be simpler ways
to screen things.

In any case, if you have interesting peptide or base sequences that can be
expressed as PERL regex's I'll be happy to add them, as I'm sure prosite 
would be too.











>From: "Dan Bolser" <dan.bolser at gmail.com>
>Reply-To: "General Forum at Bioinformatics.Org" 
><bio_bulletin_board at bioinformatics.org>
>To: "General Forum at Bioinformatics.Org" 
><bio_bulletin_board at bioinformatics.org>
>Subject: Re: [BiO BB] Enhancer databases
>Date: Tue, 25 Sep 2007 11:43:29 +0200
>
>I think I spammed this once already, but here goes anyway,
>
>Here are some hits to the search 'Enhancers' on the MetaBase database;
>
>http://biodatabase.org/index.php/Special:Search?search=enhancers&go=Go
>
>
>MetaBase is a database of databases - any feedback is welcome!
>
>Dan.
>
>
>On 22/09/2007, Maximilian Haeussler <maximilianh at gmail.com> wrote:
> > There are some:
> > oreganno (mostly mammals), cisred, flyreg (flies), dbtgr (ciona)...
> >
> > depends on what you want to do...
> >
> > max
> >
> >
> > On 21/08/2007, soorya kiran <kiran.soorya at gmail.com> wrote:
> > >
> > > *Hi all,*
> > > **
> > > *It will be appreciable if any one guide me, to find enhancer 
>databases or
> > > related algorithams *
> > > *Thanks in advance*
> > > **
> > > *Sri*
> > > _______________________________________________
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> > >
> >
> >
> >
> > --
> > Maximilian Haeussler,
> > skype: maximilianhaeussler
> > office: +33 1 69 82 41 29
> > _______________________________________________
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> >
>
>
>--
>hello
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