[BiO BB] Ensembl and Gene Ontology terms

Dan Bolser dan.bolser at gmail.com
Tue Feb 12 04:15:48 EST 2008

You could try SRS?

Not sure if it has what you need... Else I think Uniprot has links to
GO and Ensembl ... I think. At least Uniprot links to go, and SRS
links Uniprot and Ensembl! You would think we had all this sorted out
by now!


Talk to the experts;

On 11/02/2008, Paco B C <mleczny at gmail.com> wrote:
> Hi!
> this is my first message in this list. My name is Paco and I'm doing my PhD.
> on Bioinformatics in University of Leuven, Belgium.
> I would like to build a java module that, given a list of Ensembl Gene
> Identifiers, it would give back their related Gene Ontology terms. I've
> accessed the GO database, but I can't find ENSG terms and I've read in the
> Ensembl website that they give the link to external databases for
> translation and transcript objects but not for genes (maybe in the future,
> but not now).
> My question is, do you know which database could I query in order to get
> this relation within Ensembl and GO terms?
> Thanks!
> Paco
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