[BiO BB] how to grep DNA from protein

Abhishek Pratap abhishek.vit at gmail.com
Tue Nov 18 13:26:51 EST 2008

Dear Senthil

You have mentioned all the right alternatives. If you could past a line from
this file format and what pattern you would like to catch. I might be able
to propose a regex for the same.


On Tue, Nov 18, 2008 at 5:47 AM, senthil kumar <kailsen at yahoo.com> wrote:

> Hi  friends,
>  i have a serious problem, I wanted to grep all the nucleic acid
> Coordiantes line from a ribosome PDBfile  and store in separate file, so  i
> wish to do for some twenty files.. any help is welcomed,
> think its is possible by perl or awk or sed .or   "shell Grep " ???
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Abhishek Pratap
Assistant, Aebersold Lab
Institute for Systems Biology, Seattle
1441 N. 34th St.
Seattle, WA 98103
ph  001-(206) 732-1419
fax 001-(206) 299-6572

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