[BiO BB] Molecular Simulation tool

[Harry Mangalam]

Especially if you have a compatible Graphics card, the Zephyr app 
(https://simtk.org/home/zephyr) is GPGPU-enabled with very good speedups for 
some approaches.  Uses VMD & Gromacs.

versions for Win/Lin/Mac

hjm

On Thursday 30 July 2009 00:19:30 Shameer Khadar wrote:
> Gromacs is your best friend or NAMD for sure.
>
> Cheers,
> K. Shameer
> NCBS - TIFR
>
> On Wed, Jul 29, 2009 at 6:54 PM, VIPIN THOMAS <vipin.skb at gmail.com> wrote:
> > Hi,
> >
> > Can anyone suggest me a simulation tool, preferably a freeware, with
> > features like structure refinement, energy minimisation and dynamics
> > simulations.
> >
> > Thanks in advance
> > VIPIN
> >
> > --
> > VIPIN THOMAS
> > Nila, Techno Park
> > Thiruvananthapuram
> > INDIA- 695 581
> > www.sooryakiran.com
> > Ph: 91-9895429350
> > _______________________________________________
> > BBB mailing list
> > BBB at bioinformatics.org
> > http://www.bioinformatics.org/mailman/listinfo/bbb
>
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Harry Mangalam - Research Computing, NACS, Rm 225 MSTB, UC Irvine
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