[BiO BB] kegg format changed

Martin Gollery marty.gollery at gmail.com
Wed Jun 9 13:46:24 EDT 2010


Thanks for the info, Christoph. I have a rarely-used program that uses KEGG
and it is nice to have the info before it breaks!

Marty Gollery

On Wed, Jun 9, 2010 at 3:46 AM, Dr. Christoph Gille <
christoph.gille at charite.de> wrote:

> Dear Colleagues,
>
> The format of the reaction-List in KEGG www.genome.jp/kegg/ has
> changed recently. Therefore features of the STRAP /
> Metannogen-software http://www.bioinformatics.org/strap/ were
> not working for a while.
>
> Please be aware that also other Bioinformatics software using KEGG
> might be affected.
>
> This shows how important it is to contact the author of a
> Bioinformatics program if something stopped working.
>
> it was:
> PATHWAY     PATH: rn00130  Ubiquinone and other terpenoid-quinone
> biosynthesis
>            PATH: rn01053  Biosynthesis of siderophore group nonribosomal
>                           peptides
>            PATH: rn01100  Metabolic pathways
> ENZYME      5.4.4.2
>
>
>
> Now it is:
> PATHWAY     rn00130  Ubiquinone and other terpenoid-quinone biosynthesis
>            rn01053  Biosynthesis of siderophore group nonribosomal peptides
>            rn01100  Metabolic pathways
>            rn01110  Biosynthesis of secondary metabolites
> ENZYME      5.4.4.2
>
> Cheers
>
> Christoph
>
>
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>



-- 
-- 
Martin Gollery
Senior Bioinformatics Scientist
Tahoe Informatics
www.bioinformaticist.biz
www.hiddenmarkovmodels.com



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