[BiO BB] GC content

[Naveen Joshi]

Hi Kiekyon

      For obtaining any information about the fungal genes and protein you
can refer to the Saccharomyces Genome Database(SGD). If you are not able to
find the specific information its always advisable to ask the curators. I am
working on the evolution of yeast genes and I also did the same thing when I
could not find the information I was looking for. They sent me few links
which really helped me a lot.

     Hope it helps you too.

On Mon, Mar 8, 2010 at 11:53 PM, <kiekyon.huang at gmail.com> wrote:

> Hi all,
>
> I am looking for materials on the genomic GC content in fungi. Does anybody
> know of such resources?
> I had a fungal genome with a genomic GC content of 60%, 60.7% in the coding
> region, and 58% in the non-coding. Need to compare this with other related
> fungi. Also, I would like to know what analysis would be more meaningful in
> this aspect. CpG island or just CpG dinucleotide?
>
> thanks a lot!
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-- 
Regards,

Naveen Joshi
Undergraduate Intern,
Computational Evolution Group,
University of Auckland,
New Zealand
00642102249099