[Bio-linux-dev] mothur

[Tony Travis]

On 10/03/12 16:39, Rustam Aminov wrote:
> Hello, Tony.
> If you want to report another problem with biolinux then it's
> the seaview programme in it.
> If you wish to run the PhyML under the seaview, it
> returns an error message that seaview cannot find PhyML.

Hi, Rustam.

PhyML is installed on "topcat":

> root at topcat:~# dpkg -l '*phyml*'
> Desired=Unknown/Install/Remove/Purge/Hold
> | Status=Not/Inst/Cfg-files/Unpacked/Failed-cfg/Half-inst/trig-aWait/Trig-pend
> |/ Err?=(none)/Reinst-required (Status,Err: uppercase=bad)
> ||/ Name                        Version                     Description
> +++-===========================-===========================-======================================================================
> ii  bio-linux-phyml             1:1bl-0                     PhyML is a phylogeny software based on the maximum-likelihood principl
> ii  phyml                       1:200900706-2               Phylogenetic estimation using Maximum Likelihood

I've CC'ed your report to the Bio-Linux developer list.

Bye,

   Tony.