Glen Otero <gotero at linuxprophet.com> wrote: > I've attached the new modulefiles rpm. It includes the changes you > suggested. Let me know how it works for you. I'll build a new BioBrew > roll after I hear how it works. > > Sorry again about the delay. No problem, we were testing on a fixed number of nodes, but just moved to a production system, which we're bringing online in parts. I keep forgetting to fix the z-biomodules.csh file and end up chasing strange bugs. There are a couple of problems with the new RPM. You need to increment the version or build number, it won't install the new one if it has the same version as the old one. You should also fix the z-biomodules.sh # Additional modules for biobrew # export MODULEPATH=${MODULEPATH:+$MODULEPATH:}/opt/BioBrew/modulefiles The module files aren't actually being used, are they? I have none of the bioinformatics tools in my path, and can't run EMBOSS programs (library problems, ACD problems), because the environment isn't set up for EMBOSS. The modulefiles rpm has no documentation, so I can't figure out if I broke something. How do the modulefiles work? I'm willing to write up some of them if you'll tell me how (EMBOSS has no modulefile). -- Humberto Ortiz Zuazaga Programmer-Archaeologist High Performance Computing facility University of Puerto Rico http://www.hpcf.upr.edu/~humberto/ -------------- next part -------------- A non-text attachment was scrubbed... Name: not available Type: application/pgp-signature Size: 188 bytes Desc: not available Url : http://bioinformatics.org/pipermail/biobrew-users/attachments/20041014/5e1f2f57/attachment.bin