[BioBrew Users] HOWTOs etc

Glen Otero gotero at linuxprophet.com
Thu Jul 28 01:49:04 EDT 2005


On Jul 27, 2005, at 9:19 PM, Denis O'Meally wrote:

>
> Hi Glen,
>
> I'd be happy to - in fact I've done so for our system by means of a
> wiki. Would it be worth setting up a one for biobrew and its many  
> apps -
> at leat with enough detail for a basic run?

Sounds good. Are you volunteering? : )

> If not, should I just post
> 'em here?
>
> As for modeltest, its probably not really worth including after some
> further discussions - the bulk of the work is done by paup (commercial
> phylogeny package). modeltest simply parses its output and converts it
> into something useful - isn't worth farming out, and could just sit  
> on a
> desktop.

Roger that. I'll keep it out. Just clustalw-mpi then.
>
> One other query I had probably belongs on the rocks list, but I was
> wondering if anyone has integrated their cluster into a windowns  
> domain
> - ie samba sharing home dirs and windbind authenticating against an  
> AD?
> Rocks docs mention NIS authentication, but I'm not sure that'd apply
> here...

Definitely a question for the Rocks list.

Glen


>
> Denis O'Meally
> Collection Manager
> Evolutionary Biology Unit
> The Australian Museum       Phone +61 2 9320 6488
> 6 College St                Fax   +61 2 9320 6020
> SYDNEY NSW 2010 AUSTRALIA   Email denisom at austmus.gov.au
> http://www.amonline.net.au/evolutionary_biology
>
> Message: 1
> Date: Mon, 25 Jul 2005 16:00:18 -0700
> From: Glen Otero <gotero at linuxprophet.com>
> Subject: Re: [BioBrew Users] RE: Clustalw-mpi
> To: The Virtual BioBrew Think Tank
>     <BioBrew-Users at bioinformatics.org>
> Message-ID: <5C885A19-0BE6-4434-BF12-2712B626BBB8 at linuxprophet.com>
> Content-Type: text/plain; charset=US-ASCII; delsp=yes; format=flowed
>
> Denis-
>
> Would you be willing to write short HOWTOs for using clustalw-mpi and
> modeltest? The HOWTOs would greatly help me get your requests into
> the next BioBrew release and help others use the tools.
>
> Thanks!
>
> Glen
>
>
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