[Bioclusters] Blast Source

Joseph Landman bioclusters@bioinformatics.org
15 Apr 2003 19:29:54 -0400


ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/CURRENT/

On Tue, 2003-04-15 at 19:19, Tim Harsch wrote:
> A colleague of mine is trying to use blast to determine very loose matches.
> He would like to change the minimum seed length, which is hard-coded into
> Blast, from 7 to 5.  Does anyone know a backdoor way, ie undocumented
> parameter, which could do this?  Or, where we might find the blast source
> code so we can make this change manually?

-- 
Joseph Landman, Ph.D
Scalable Informatics LLC
email: landman@scalableinformatics.com
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