ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools/CURRENT/ On Tue, 2003-04-15 at 19:19, Tim Harsch wrote: > A colleague of mine is trying to use blast to determine very loose matches. > He would like to change the minimum seed length, which is hard-coded into > Blast, from 7 to 5. Does anyone know a backdoor way, ie undocumented > parameter, which could do this? Or, where we might find the blast source > code so we can make this change manually? -- Joseph Landman, Ph.D Scalable Informatics LLC email: landman@scalableinformatics.com web: http://scalableinformatics.com phone: +1 734 612 4615