Hello Joe, My default SUSE opteron configuration may not have the libs to run your build: opt:/u1/gcgblast # formatdb -p F -i test & formatdb: /lib64/libc.so.6: version `GLIBC_2.3' not found (required by formatdb) [1] 10941 [1] Exit 1 formatdb -p F -i test opt:/u1/gcgblast # ldd /usr/local/bin/formatdb /usr/local/bin/formatdb: /lib64/libc.so.6: version `GLIBC_2.3' not found (required by /usr/local/bin/formatdb) libm.so.6 => /lib64/libm.so.6 (0x0000002a9566a000) libc.so.6 => /lib64/libc.so.6 (0x0000002a957c2000) /lib64/ld-linux-x86-64.so.2 => /lib64/ld-linux-x86-64.so.2 (0x0000002a95556000) I assume these are 64 bit executables? Is there a newer libc needed? Thanks for your (past and present) help with the opteron platform. Nathan Joseph Landman wrote: >Hi Doug: > > These are 2.2.6. The tree's VERSION (ncbi/VERSION) reads: > >[landman@squash.scalableinformatics.com:/big/t/ncbi] >8 >cat VERSION >Tue Apr 22 10:41:40 EDT 2003 > > Please let me know if you have problems with them. This was a first >pass at getting working systems. > >Joe > >On Tue, 2003-08-12 at 20:17, Doug Shubert wrote: > > >>Hello Joe, >>What version of ncbitools are you working with ? >>Doug >> >>Joe Landman wrote: >> >> >> >>>Its up. Please let me know if it works. This is a snapshot from a >>>build done in June, Download is >>>http://scalableinformatics.com/downloads/opteron.ncbitools.tar.gz . It >>>is 29MB. >>> >>>Joe >>> >>>On Tue, 2003-08-12 at 15:46, Joe Landman wrote: >>> >>> >>>>On Tue, 2003-08-12 at 13:11, Nathan Siemers wrote: >>>> >>>> >>>>>That's great news, Joe. Has this build passed any regression tests, >>>>>i.e. rigorous >>>>>comparison to output from blastall on other architectures? >>>>> >>>>> >>>>I have not had an opteron to run on long enough to run my normal tests. >>>>It did generate the same results for my short tests. >>>> >>>> >>>-- >>>Joseph Landman, Ph.D >>>Scalable Informatics LLC, >>>email: landman@scalableinformatics.com >>>web : http://scalableinformatics.com >>>phone: +1 734 612 4615 >>> >>>_______________________________________________ >>>Bioclusters maillist - Bioclusters@bioinformatics.org >>>https://bioinformatics.org/mailman/listinfo/bioclusters >>> >>> >>_______________________________________________ >>Bioclusters maillist - Bioclusters@bioinformatics.org >>https://bioinformatics.org/mailman/listinfo/bioclusters >> >>