[Bioclusters] mpiBLAST compile error

Joseph Landman bioclusters@bioinformatics.org
Fri, 28 Feb 2003 17:22:53 -0500


Hi Jones:

  Either from the direct toolkit, or I can craft a source RPM to go with 
my binary RPMs (http://scalableinformatics.com/downloads/).  Where did 
you get the blast RPM BTW?

Joe

Jones George wrote:
> Joe,
> Thanks for the clarification.
> 
> I do not have this file on the system.. anywhere...
> 
> i do not have: xmlblast.h, mblast.h, objblst3.h, netblap3.h
> 
> I am trying to understand why they are not part of:
> 
> ncbi-6.0-1 RPM...
> 
> Maybe I need to reinstall install the toolkit from some other source..
> 
> any recommendations?
> 
> Thanks,
> jones
> 
> 
> 
> 
>>>>landman@scalableinformatics.com 02/28/03 04:56PM >>>
> 
> Jones:
> 
>    These are not libraries, but C header files.  On your system, try
> 
> 	locate xmlblast.h
> 
> and see if you see it anywhere.  If so, add a pointer to this file in 
> your Makefile.
> 
> 	-I/path/to/include/files
> 
> along with the other paths that they have there for include directories.
> 
> Joe
> 
> --
> Joseph Landman, Ph.D
> Scalable Informatics LLC,
> email: landman@scalableinformatics.com 
> web  : http://scalableinformatics.com 
> phone: +1 734 612 4615
> 
> Jones George wrote:
> 
>>I understand.. but I installed the  RPM
>>and these 4 libs were not installed.
>>I cannot find them anywhere in the system.
>>
>>
>>
>>>>>landman@scalableinformatics.com 02/28/03 04:30PM >>>
>>
>>These files are located in  ncbi/include/ from the toolkit source.
>>
>>
>>
>>_______________________________________________
>>Bioclusters maillist  -  Bioclusters@bioinformatics.org 
>>https://bioinformatics.org/mailman/listinfo/bioclusters 
>>
>>_______________________________________________
>>Bioclusters maillist  -  Bioclusters@bioinformatics.org 
>>https://bioinformatics.org/mailman/listinfo/bioclusters 
> 
> 
> 
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> 
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-- 
Joseph Landman, Ph.D
Scalable Informatics LLC,
email: landman@scalableinformatics.com
web  : http://scalableinformatics.com
phone: +1 734 612 4615