[Bioclusters] Looking for information

Philip MacMenamin bioclusters@bioinformatics.org
Thu, 2 Oct 2003 12:37:13 -0400

Hi Srihari, 

There is an application called interproScan that appears to fit your 
criterea. I was talking to the author, and it has been designed to be 
clustered. http://www.ebi.ac.uk/interpro/scan.html. 

If you can get it working on the cluster, I would be interested in knowing 
how you did it. I tried to get it running on a linux MOSIX cluster, but 
failed. It wont migrate the processed off the job scheduler node for me. 

Tell me if you decide to run InterPro. 

Good luck, 
On Thursday 02 October 2003 12:25 pm, you wrote:
> Hello list members,
>   I am new to bioinformatics field, but not new to cluster computing. I am
> in need of help here. I am looking for some interesting demo cluster
> applications in the bio- field. Specifically looking for applications that
> I can download (free or evaluation versions), compatible with Linux,
> parallel/distributed, and those I can automate the processing via a batch
> scheduling system. Graphical applications are also fine. If you could
> point me to a thread in the archive similar to this topic or some URLs,
> I'd really appreciate it.
> Thank you,
> Srihari
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