I think the dump would be too big but the perl script to create the fasta from the dump at ebi would be great. We are using just a 4-way Sun box to do the blast but will distribute it out to a few G5 and Opteron boxes. Thanks LAI Loong-Fong On Apr 15, 2004, at 11:51 PM, Guenther Weberndorfer wrote: > If you need the blast-db (ie. fasta file, formatdb) I can offer a dump > from our local seqbase (holds embl rel 78), or a small perl script > that > creates the fasta from the dumps at ebi. > > But do you have a decent machine to do a blast in ALL Embl? or would it > be sufficient to reduce it to certain organisms? > > On Thu, 2004-04-15 at 19:50, LAI Loong Fong wrote: >> How do I create a blastable database of the embl databases from EBI? >> >> TIA >> LAI Loong-Fong >> >> _______________________________________________ >> Bioclusters maillist - Bioclusters@bioinformatics.org >> https://bioinformatics.org/mailman/listinfo/bioclusters > -- > Guenther Weberndorfer <guenther.weberndorfer@insilico.com>