[Bioclusters] Re: [Biodevelopers] RDBMS and Bioinformatics
Dr. Anil Singla
bioclusters@bioinformatics.org
Tue, 16 Mar 2004 23:59:54 +0530
<html><div style='background-color:'><DIV class=RTE>
<P>Dear Dr. Hari,</P>
<P>I can help you to maintain this data. If you require any help in this send me the type of data to be managed and i shall send you the details accordingly.</P>
<P>DR. ANIL SINGLA</P>
<P>singlaanil@hotmail.com<BR><BR></P></DIV>
<DIV></DIV>>From: "Dr. Hari Koduvely" <HARI_KODUVELY@YAHOO.COM>
<DIV></DIV>>Reply-To: bioclusters@bioinformatics.org
<DIV></DIV>>To: bioclusters@bioinformatics.org, biodevelopers@bioinformatics.org
<DIV></DIV>>Subject: Re: [Bioclusters] Re: [Biodevelopers] RDBMS and Bioinformatics
<DIV></DIV>>Date: Tue, 16 Mar 2004 10:05:41 -0800 (PST)
<DIV></DIV>>
<DIV></DIV>>Hi all, many thanks for your overwelhming responses to
<DIV></DIV>>my simple question. I am trying to get into data
<DIV></DIV>>warehousing also (from just data analysis) and I was
<DIV></DIV>>thinking of what to learn for datawarehousing in
<DIV></DIV>>Bioinformatics. That is why I posed this question.....
<DIV></DIV>>
<DIV></DIV>>Regds
<DIV></DIV>>-Hari
<DIV></DIV>>
<DIV></DIV>>--- Dan Bolser <DMB@MRC-DUNN.CAM.AC.UK>wrote:
<DIV></DIV>> > On Mon, 15 Mar 2004, Titus Brown wrote:
<DIV></DIV>> >
<DIV></DIV>> > > -> Hi, I would like to know if RDBMS (Relational
<DIV></DIV>> > Data
<DIV></DIV>> > > -> Base Management Systems) is extensively used in
<DIV></DIV>> > > -> Bioinformatics Data Bases. If it indeed true,
<DIV></DIV>> > what is
<DIV></DIV>> > > -> the most suited RDBMS, Oracle?
<DIV></DIV>> > >
<DIV></DIV>> > > I believe that NCBI uses SQLserver for some
<DIV></DIV>> > things, and MySQL has
<DIV></DIV>> > > been used by several of the public projects
<DIV></DIV>> > (ENSEMBL, for one).
<DIV></DIV>> > > I use PostgreSQL because of it's support for an
<DIV></DIV>> > object/relational
<DIV></DIV>> > > data model.
<DIV></DIV>> > >
<DIV></DIV>> > > I don't know of a project using Oracle but there
<DIV></DIV>> > must be some out there.
<DIV></DIV>> >
<DIV></DIV>> > MSD
<DIV></DIV>> >
<DIV></DIV>> > >
<DIV></DIV>> > > I'm not sure what distinguishes one database as
<DIV></DIV>> > being better for
<DIV></DIV>> > > bioinformatics as a whole; it depends an awful lot
<DIV></DIV>> > on what you're
<DIV></DIV>> > > doing...
<DIV></DIV>> > >
<DIV></DIV>> > > --titus
<DIV></DIV>> > > _______________________________________________
<DIV></DIV>> > > Biodevelopers mailing list
<DIV></DIV>> > > Biodevelopers@bioinformatics.org
<DIV></DIV>> > >
<DIV></DIV>> >
<DIV></DIV>>https://bioinformatics.org/mailman/listinfo/biodevelopers
<DIV></DIV>> > >
<DIV></DIV>> >
<DIV></DIV>> > _______________________________________________
<DIV></DIV>> > Bioclusters maillist -
<DIV></DIV>> > Bioclusters@bioinformatics.org
<DIV></DIV>> >
<DIV></DIV>>https://bioinformatics.org/mailman/listinfo/bioclusters
<DIV></DIV>>
<DIV></DIV>>
<DIV></DIV>>=====
<DIV></DIV>>Dr. Hari Koduvely, Ph.D.
<DIV></DIV>>Research Scientist
<DIV></DIV>>Unilever Research India
<DIV></DIV>>64 Main Road, Whitefield
<DIV></DIV>>Bangalore 560066, INDIA
<DIV></DIV>>Ph:+91 80 5139 5629 (Office)
<DIV></DIV>> +91 80 5221790 (Res)
<DIV></DIV>>
<DIV></DIV>>__________________________________
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<DIV></DIV>>_______________________________________________
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<DIV></DIV>>https://bioinformatics.org/mailman/listinfo/bioclusters
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