[Bioclusters] Need some 'dvice on a cluster for EST/cDNA assembly, clustering

Dan Swan bioinformatics.lists at gmail.com
Mon Mar 7 13:37:11 EST 2005


On Mon, 7 Mar 2005 10:03:21 -0800 (PST), Rayson Ho
<raysonlogin at yahoo.com> wrote:
> --- Aaron Darling <darling at cs.wisc.edu> wrote:
> > Perhaps you need one of these:
> >
> > http://www.orionmulti.com/
> 
> Hmm, their systems ship with SGE:
> 
> "Development Tools and Libraries:
> - Message passing libraries: Orion-optimized MPI library based on
>  MPICH2, PVM, and LAM
> 
> - SGE job scheduler"
> 
> What version of SGE they ship??

If it's got the BioTeam software on there probably 6.0 u1 - at least
that's what they're shipping on their Xserve hardware..

regards,

Dan
-- 
Dr Daniel Swan - Head, Bioinformatics Support Unit
924 Claremont Tower, University of Newcastle, Newcastle, NE1 7RU
Tel: +44 (0)191 222 7856
http://www.ncl.ac.uk/bioinformatics/support || d.c.swan at ncl.ac.uk


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