[Bioclusters] mpiBLAST-PIO

Angulo, David dangulo at cti.depaul.edu
Tue Aug 22 11:27:04 EDT 2006


I believe the PIO adds parallel input/output, because reading from disk is orders of magnitude slower .

David Sigfredo Angulo
Faculty
DePaul University
School of Computer science, Telecommunications, and Information Systems




-----Original Message-----
From: bioclusters-bounces+dangulo=cti.depaul.edu at bioinformatics.org on behalf of Daniel Xavier de Sousa
Sent: Tue 8/22/2006 9:04 AM
To: HPC in Bioinformatics
Subject: Re: [Bioclusters] mpiBLAST-PIO
 
Please,

What is the difference between mpiBLAST and mpiBLAST-PIO?

Thanks,
Daniel

Bernard Li <bli at bcgsc.ca> escreveu:     mpiBLAST-PIO     Hi guys:
 
 I was wondering if anybody on this list has done some performance tests with mpiBLAST-PIO?
 
 http://mpiblast.lanl.gov/
 
 Thanks,
 
 Bernard
  
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