[Bioclusters] mpiblast w/ SGE problem?

[Iddo Friedberg]

One more thing:

I ssh'd to the node where mpiblast is running, and there is an ssh attempt
to the other nodes from the machines file: (ps -elf output)

0 S idoerg    5795  5645  0  75   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-3-1 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-3-1 \-p4rmrank 3
0 S idoerg    5796  5645  0  76   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-3-1 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-3-1 \-p4rmrank 4
0 S idoerg    5797  5645  0  76   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-3-1 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-3-1 \-p4rmrank 5
0 S idoerg    5798  5645  0  75   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-1-2 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-1-2 \-p4rmrank 6
0 S idoerg    5799  5645  0  76   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-1-4 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-1-4 \-p4rmrank 7
0 S idoerg    5800  5645  0  75   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-3-7 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-3-7 \-p4rmrank 8
0 S idoerg    5801  5645  0  76   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-3-7 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-3-7 \-p4rmrank 9
0 S idoerg    5802  5645  0  76   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-3-7 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-3-7 \-p4rmrank 10
0 S idoerg    5803  5645  0  76   0 -  4660 -      15:16 ?        00:00:00
ssh ikelite-0-12 -l idoerg -n /opt/Bio/mpiblast/bin/mpiblast ikelite-3-0
35878 \-p4amslave \-p4yourname ikelite-0-12 \-p4rmrank 11


-- 

I. Friedberg

"The only problem with troubleshooting is that
sometimes trouble shoots back."