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<DIV><FONT face=新細明體 color=#0000ff size=2></FONT> </DIV><SPAN
class=997390914-21122004></SPAN><FONT face=新細明體><FONT color=#0000ff><FONT
size=2>Dear All:<SPAN
class=997390914-21122004></SPAN></FONT></FONT></FONT><BR>
<DIV class=OutlookMessageHeader lang=zh-tw dir=ltr align=left><SPAN
class=997390914-21122004><FONT face=新細明體 color=#0000ff size=2>
</FONT></SPAN></DIV>
<DIV></DIV>
<DIV><SPAN class=329263913-21122004><FONT size=2>Did anyone had successfuly
install mpiblast 1.3 on mac os x (Xserve G5)?</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT size=2>I've some problem to install
it</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT size=2>I've compiled NCBI toolkit
without error messages</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2>$patch -p1 <
../mpiblast-1.3.0/ncbi_Oct2004_evalue.patch (within the 'ncbi'
directory)<BR>$ncbi/make/makedis.csh<BR>$./configure with the
--disable-dependency-tracking<BR>$./configure
--disable-dependency-tracking<BR>$./configure
--with-ncbi=/usr/local/ncbi<BR>$./configure
--prefix=/usr/local/mpiblast</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2>but when I build
mpiblast, it response following messages</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2>I also had check
previous discussion about mpiblast 1.2.1, the they seems sort of
diffent</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2>could anyone help me
?</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2>ian
chang</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2><SPAN
class=997390914-21122004>mpiBlast 1.3</SPAN></FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2><SPAN
class=997390914-21122004>NCBI Toolkit 200410
installed</SPAN></FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體 size=2><SPAN
class=997390914-21122004>gcc (GCC) 3.3 20030304</SPAN></FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT face=新細明體
size=2></FONT></SPAN> </DIV>
<DIV><SPAN class=329263913-21122004><FONT size=2>$make</FONT></SPAN></DIV>
<DIV><SPAN class=329263913-21122004><FONT size=2>make all-am<BR>if mpicc
-DHAVE_CONFIG_H -I. -I. -I. -I../include/ -I/usr/local/ncbi/include/
-DUSING_MPI -DINSTALL_PREFIX="\"/usr/local/mpiblast\"" -g -O2 -MT
mpiblast-blast_hooks.o -MD -MP -MF ".deps/mpiblast-blast_hooks.Tpo" -c -o
mpiblast-blast_hooks.o `test -f 'blast_hooks.c' || echo './'`blast_hooks.c;
\<BR>then mv -f ".deps/mpiblast-blast_hooks.Tpo"
".deps/mpiblast-blast_hooks.Po"; else rm -f ".deps/mpiblast-blast_hooks.Tpo";
exit 1; fi<BR>blast_hooks.c: In function `initBLAST':<BR>blast_hooks.c:695:
error: structure has no member named `query_adjustments'<BR>blast_hooks.c:696:
error: structure has no member named `effective_db_lengths'<BR>blast_hooks.c: In
function `getQuery':<BR>blast_hooks.c:747: error: structure has no member named
`current_queryI'<BR>blast_hooks.c: In function
`runBLAST':<BR>blast_hooks.c:1455: error: structure has no member named
`calculate_statistics_and_exit'<BR>blast_hooks.c:1457: error: structure has no
member named `calculate_statistics_and_exit'<BR>blast_hooks.c:1478: error:
structure has no member named `current_queryI'<BR>blast_hooks.c: In function
`outputResults':<BR>blast_hooks.c:1573: error: structure has no member named
`calculate_statistics_and_exit'<BR>mpicc: No such file or directory<BR>make[1]:
*** [mpiblast-blast_hooks.o] Error 1<BR>make: *** [all] Error
2<BR></FONT></SPAN></DIV></BODY></HTML>