[Molvis-list] Additional questions

[Dan Bolser]

My favourite bond prediction server is ...

http://www.mrc-lmb.cam.ac.uk/genomes/nci/

However, it looks down for the time being.


Here is the reference...

http://www.pubmedcentral.nih.gov/articlerender.fcgi?artid=168935

It predicts canonical bonds as well as 'non-canonical', but not
electrostatic interactions (as far as I know).


Predicting quaternary structure is a big field, with many different groups
trying many different approaches. I would suggest you ask your question here

pdb-l at rcsb.org

All the best,
Dan.


On Thu, 18 Nov 2004, [iso-2022-jp] $BHSDM(B $B at 2@8(B wrote:

>Dear members
>
>Some times ago, I asked you about H-bonds visualization in homodimer.
>But I had additional questions following below.
>
>1.How to detect monomer-monomer interactions, H-bonds, hydrophobic
>   interactions and electrostatic interactions etc. And Which 
>visualization-
>   tool is best for visualizing them?
>
>2.Are there any tools to predict quaternary structures and it's interaction
>   sites from tertiary structures?
>
>Tell me please.
>
>>From H.Iiduka
>
>e-mail: haruo_ii at hotmail.com
>
>_________________________________________________________________
>$B3Z$7$$3(J8;z$G%3%3%mEA$o$k%a%C%;%s%8%c!<(B http://messenger.msn.co.jp/ 
>
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